Snakemake
5.3.0
Getting started
Installation
Examples
Snakemake Tutorial
Executing workflows
Executing Snakemake
Defining workflows
Writing Workflows
Rules
Configuration
Modularization
Remote files
Utils
Distribution and Reproducibility
Reports
API Reference
The Snakemake API
Additional utils
Project Info
Citing and Citations
More Resources
Frequently Asked Questions
Contributing
Credits
Change Log
License
Snakemake
Docs
»
Index
Index
A
|
F
|
L
|
M
|
Q
|
R
|
S
|
U
|
V
A
AlwaysQuotedFormatter (class in snakemake.utils)
available_cpu_count() (in module snakemake.utils)
F
format() (in module snakemake.utils)
format_element() (snakemake.utils.SequenceFormatter method)
L
linecount() (in module snakemake.utils)
listfiles() (in module snakemake.utils)
M
makedirs() (in module snakemake.utils)
min_version() (in module snakemake.utils)
Q
QuotedFormatter (class in snakemake.utils)
R
R() (in module snakemake.utils)
read_job_properties() (in module snakemake.utils)
report() (in module snakemake.utils)
S
SequenceFormatter (class in snakemake.utils)
simplify_path() (in module snakemake.utils)
snakemake() (in module snakemake)
snakemake.utils (module)
U
update_config() (in module snakemake.utils)
V
validate() (in module snakemake.utils)