Here is a list of all class members with links to the classes they belong to:
- s -
- S
: RDKit::Atom
, RDKit::MolDraw2D
- sbmb
: ForceFields::MMFF::MMFFProp
- scale()
: RDKit::MolDraw2D
- scaleForceConstant()
: ForceFields::UFF::TorsionAngleContrib
- scatter()
: ForceFields::ForceField
- score()
: RDKit::MolAlign::O3A
- scoreAlignment()
: RDKit::MolAlign::SDM
- SDM()
: RDKit::MolAlign::SDM
- SDMolSupplier()
: RDKit::SDMolSupplier
- SDWriter()
: RDKit::SDWriter
- second
: RDKit::SLNParse::AttribType
- Seed
: RDKit::FMCS::ExecStatistics
, RDKit::FMCS::Seed
- SeedAtomIdxMap
: RDKit::FMCS::MolFragment
- SeedCheck
: RDKit::FMCS::ExecStatistics
- SeedProcessed
: RDKit::MCSProgressData
- seekoff()
: boost_adaptbx::python::streambuf
- seekpos()
: boost_adaptbx::python::streambuf
- Serialize()
: RDCatalog::Catalog< entryType, paramType >
, RDCatalog::CatalogEntry
, RDCatalog::CatalogParams
, RDCatalog::HierarchCatalog< entryType, paramType, orderType >
, RDCatalog::LinearCatalog< entryType, orderType >
, RDKit::FragCatalogEntry
, RDKit::FragCatParams
, RDKit::MolCatalogEntry
, RDKit::MolCatalogParams
- set()
: RDKit::FMCS::TArray2D< T >
- set3D()
: RDKit::Conformer
- setActiveAtom()
: RDKit::RWMol
- setActiveConformer()
: RDKit::MolChemicalFeature
- setAltLoc()
: RDKit::AtomPDBResidueInfo
- setAtomBookmark()
: RDKit::ROMol
- setAtomicNum()
: RDKit::Atom
- setAtomPos()
: RDKit::Conformer
- setBeginAtom()
: RDKit::Bond
- setBeginAtomIdx()
: RDKit::Bond
- setBiasList()
: RDInfoTheory::InfoBitRanker
- setBit()
: BitVect
, ExplicitBitVect
, SparseBitVect
- setBitId()
: RDCatalog::CatalogEntry
- setBitIdList()
: RDInfoTheory::BitCorrMatGenerator
- setBondBookmark()
: RDKit::ROMol
- setBondDir()
: RDKit::Bond
, RDKit::QueryBond
- setBondType()
: RDKit::Bond
, RDKit::QueryBond
- setCatalogParams()
: RDCatalog::Catalog< entryType, paramType >
- setChainId()
: RDKit::AtomPDBResidueInfo
- setChiralTag()
: RDKit::Atom
- setColour()
: RDKit::MolDraw2D
, RDKit::MolDraw2DCairo
, RDKit::MolDraw2DQt
, RDKit::MolDraw2DSVG
, RDKit::MolDraw2Dwx
- setDash()
: RDKit::MolDraw2D
- setData()
: RDKit::SDMolSupplier
, RDKit::SmilesMolSupplier
, RDKit::TDTMolSupplier
- setDataFunc()
: Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- setDescription()
: Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
, RDKit::FragCatalogEntry
, RDKit::MolCatalogEntry
- setEndAtom()
: RDKit::Bond
- setEndAtomIdx()
: RDKit::Bond
- setEndsOpen()
: Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- setFamily()
: ChemicalFeatures::FreeChemicalFeature
, RDFeatures::ExplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
, RDFeatures::ImplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
- setFillPolys()
: RDKit::MolDraw2D
- setFontSize()
: RDKit::MolDraw2D
, RDKit::MolDraw2DCairo
, RDKit::MolDraw2DQt
, RDKit::MolDraw2DSVG
, RDKit::MolDraw2Dwx
- setForceV3000()
: RDKit::SDWriter
- setFormalCharge()
: RDKit::Atom
- setFPLength()
: RDCatalog::Catalog< entryType, paramType >
- setHybridization()
: RDKit::Atom
- setId()
: ChemicalFeatures::FreeChemicalFeature
, RDKit::Conformer
- setIdx()
: RDKit::Atom
, RDKit::Bond
- setImplicitPropertiesFlag()
: RDKit::ChemicalReaction
- setInsertionCode()
: RDKit::AtomPDBResidueInfo
- setIsAromatic()
: RDKit::Atom
, RDKit::Bond
- setIsConjugated()
: RDKit::Bond
- setIsHeteroAtom()
: RDKit::AtomPDBResidueInfo
- setIsotope()
: RDKit::Atom
- setKekulize()
: RDKit::SDWriter
- setLineWidth()
: RDKit::MolDraw2D
- setLoc()
: RDFeatures::ExplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
- setLower()
: Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- setLowerBound()
: DistGeom::BoundsMatrix
- setLowerBoundIfBetter()
: DistGeom::BoundsMatrix
- setLowerFragLength()
: RDKit::FragCatParams
- setMaskBits()
: RDInfoTheory::InfoBitRanker
- setMatchFunc()
: Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- setMetricFunc()
: RDDataManip::MetricMatrixCalc< vectType, entryType >
- setMMFFAngleTerm()
: RDKit::MMFF::MMFFMolProperties
- setMMFFBondTerm()
: RDKit::MMFF::MMFFMolProperties
- setMMFFDielectricConstant()
: RDKit::MMFF::MMFFMolProperties
- setMMFFDielectricModel()
: RDKit::MMFF::MMFFMolProperties
- setMMFFEleTerm()
: RDKit::MMFF::MMFFMolProperties
- setMMFFOopTerm()
: RDKit::MMFF::MMFFMolProperties
- setMMFFOStream()
: RDKit::MMFF::MMFFMolProperties
- setMMFFStretchBendTerm()
: RDKit::MMFF::MMFFMolProperties
- setMMFFTorsionTerm()
: RDKit::MMFF::MMFFMolProperties
- setMMFFVariant()
: RDKit::MMFF::MMFFMolProperties
- setMMFFVdWTerm()
: RDKit::MMFF::MMFFMolProperties
- setMMFFVerbosity()
: RDKit::MMFF::MMFFMolProperties
- setMol()
: RDKit::MolCatalogEntry
- setMoleculeFragment()
: RDKit::FMCS::Seed
- setMonomerInfo()
: RDKit::Atom
- setMonomerType()
: RDKit::AtomMonomerInfo
- setName()
: RDKit::AtomMonomerInfo
- setNegation()
: Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
- setNoImplicit()
: RDKit::Atom
- setNumDigits()
: RDKit::TDTWriter
- setNumExplicitHs()
: RDKit::Atom
- setNumRadicalElectrons()
: RDKit::Atom
- setOccupancy()
: RDKit::AtomPDBResidueInfo
- setOrder()
: RDKit::MolCatalogEntry
- setOwningMol()
: RDKit::Atom
, RDKit::Bond
, RDKit::Conformer
- setPos()
: ChemicalFeatures::FreeChemicalFeature
- setProp()
: RDKit::Atom
, RDKit::Bond
, RDKit::FragCatalogEntry
, RDKit::MolCatalogEntry
, RDKit::ROMol
- setProps()
: RDKit::MolWriter
, RDKit::PDBWriter
, RDKit::SDWriter
, RDKit::SmilesWriter
, RDKit::TDTWriter
- SetQuery()
: Queries::SetQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- setQuery()
: RDKit::Atom
, RDKit::Bond
, RDKit::QueryAtom
, RDKit::QueryBond
- setQueryMol()
: RDKit::RecursiveStructureQuery
- setResidueName()
: RDKit::AtomPDBResidueInfo
- setResidueNumber()
: RDKit::AtomPDBResidueInfo
- SetRotation()
: RDGeom::Transform3D
- SetRotationFromQuaternion()
: RDGeom::Transform3D
- setSecondaryStructure()
: RDKit::AtomPDBResidueInfo
- setSegmentNumber()
: RDKit::AtomPDBResidueInfo
- setSerialNumber()
: RDKit::AtomPDBResidueInfo
- setSphereOccupancy()
: RDGeom::UniformGrid3D
- setStereo()
: RDKit::Bond
- setStreamIndices()
: RDKit::SDMolSupplier
- setStringDrawMode()
: RDKit::MolDraw2D
- setTempFactor()
: RDKit::AtomPDBResidueInfo
- setToIdentity()
: RDGeom::Transform2D
, RDGeom::Transform3D
, RDNumeric::SymmMatrix< TYPE >
- setTol()
: Queries::EqualityQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
, Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- setTolerance()
: RDKit::FragCatParams
- setToRandom()
: RDNumeric::Vector< TYPE >
- SetTransform()
: RDGeom::Transform2D
- SetTranslation()
: RDGeom::Transform2D
, RDGeom::Transform3D
- setType()
: ChemicalFeatures::FreeChemicalFeature
, RDFeatures::ExplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
, RDFeatures::ImplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
- setTypeStr()
: RDCatalog::CatalogParams
- setupNewNeighs()
: RDDepict::EmbeddedFrag
- setUpper()
: Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- setUpperBound()
: DistGeom::BoundsMatrix
- setUpperBoundIfBetter()
: DistGeom::BoundsMatrix
- setUpperFragLength()
: RDKit::FragCatParams
- setVal()
: Queries::EqualityQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
, RDGeom::Grid3D
, RDGeom::UniformGrid3D
, RDKit::Dict
, RDKit::DiscreteValueVect
, RDKit::SparseIntVect< IndexType >
, RDNumeric::Matrix< TYPE >
, RDNumeric::SymmMatrix< TYPE >
, RDNumeric::Vector< TYPE >
- setWeights()
: RDKit::MolChemicalFeatureDef
- setWrite2D()
: RDKit::TDTWriter
- setWriteNames()
: RDKit::TDTWriter
- showmanyc()
: boost_adaptbx::python::streambuf
- signedAngleTo()
: RDGeom::Point2D
, RDGeom::Point3D
- SINGLE
: RDKit::Bond
- SingleBondExcluded
: RDKit::FMCS::ExecStatistics
- SIXTEENBITVALUE
: RDKit::DiscreteValueVect
- size()
: BitVect
, PySequenceHolder< T >
, Queries::SetQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- Size()
: RDDepict::EmbeddedFrag
- size()
: RDKit::DiscreteValueVect
, RDKit::FMCS::DuplicatedSeedCache
, RDKit::FMCS::SeedSet
, RDKit::MolAlign::O3AConstraintVect
, RDKit::MolAlign::SDM
, RDKit::SparseIntVect< IndexType >
, RDNumeric::Vector< TYPE >
- SLINK
: RDPickers::HierarchicalClusterPicker
- SLNParseException()
: RDKit::SLNParseException
- SlowMatchCallTrue
: RDKit::FMCS::ExecStatistics
- smallestValId()
: RDNumeric::Vector< TYPE >
- smarts
: RDKit::Descriptors::CrippenParams
- SmartsString
: RDKit::MCSResult
- SmilesMolSupplier()
: RDKit::SmilesMolSupplier
- SmilesParseException()
: RDKit::SmilesParseException
- SmilesWriter()
: RDKit::SmilesWriter
- SourceAtomIdx
: RDKit::FMCS::NewBond
- SP
: RDKit::Atom
- SP2
: RDKit::Atom
- SP3
: RDKit::Atom
- SP3D
: RDKit::Atom
- SP3D2
: RDKit::Atom
- SparseBitVect()
: SparseBitVect
- SparseIntVect()
: RDKit::SparseIntVect< IndexType >
- SpecialChiralityAtomCompareFunctor()
: RDKit::Canon::SpecialChiralityAtomCompareFunctor
- SpecialSymmetryAtomCompareFunctor()
: RDKit::Canon::SpecialSymmetryAtomCompareFunctor
- SquareMatrix()
: RDNumeric::SquareMatrix< TYPE >
- STEREOANY
: RDKit::Bond
- STEREOE
: RDKit::Bond
- STEREONONE
: RDKit::Bond
- STEREOZ
: RDKit::Bond
- StorageType
: RDKit::SparseIntVect< IndexType >
- streambuf()
: boost_adaptbx::python::streambuf
- streambuf_capsule()
: boost_adaptbx::python::streambuf_capsule
- StretchBendContrib()
: ForceFields::MMFF::StretchBendContrib
- structQuery
: RDKit::SLNParse::AttribType
- Symbol()
: RDKit::atomicData
- SymmMatrix()
: RDNumeric::SymmMatrix< TYPE >
- sync()
: boost_adaptbx::python::streambuf