GrammaredSequence.
degenerates
()[source]¶Find positions containing degenerate characters in the sequence.
State: Stable as of 0.4.0.
Returns: | Boolean vector where True indicates a degenerate character is
present at that position in the biological sequence. |
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Return type: | 1D np.ndarray (bool) |
See also
Examples
>>> from skbio import DNA
>>> s = DNA('ACWGN')
>>> s.degenerates()
array([False, False, True, False, True], dtype=bool)