pybedtools.scripts.intron_exon_readsΒΆ

Example from pybedtools documentation (Example 3: Count reads in introns and exons, in parallel) to count reads in introns and exons using multiple CPUs.

Functions

count_reads_in_features(features) Callback function to count reads in features
featuretype_filter(feature, featuretype) Only passes features with the specified featuretype
main() Third quick example from the documentation -- count reads introns and
subset_featuretypes(featuretype)