17 #ifndef __Speckley_BRICK_H__ 18 #define __Speckley_BRICK_H__ 20 #include <speckley/SpeckleyDomain.h> 46 double y1,
double z1,
int d0=-1,
int d1=-1,
int d2=-1,
47 const std::vector<double>& points = std::vector<double>(),
48 const std::vector<int>& tags = std::vector<int>(),
62 virtual std::string getDescription()
const;
74 virtual void write(
const std::string& filename)
const;
81 void dump(
const std::string& filename)
const;
100 int byteOrder,
int dataType)
const;
107 const dim_t* borrowSampleReferenceIDs(
int fsType)
const;
113 virtual bool ownSample(
int fsType,
index_t id)
const;
134 virtual dim_t getNumDataPointsGlobal()
const;
141 virtual void Print_Mesh_Info(
const bool full=
false)
const;
178 virtual double getLocalCoordinate(
index_t index,
int dim)
const;
184 virtual boost::python::tuple getGridParameters()
const;
193 const boost::python::tuple& filter)
const;
217 virtual dim_t getNumNodes()
const;
218 virtual dim_t getNumElements()
const;
219 virtual dim_t getNumDOF()
const;
231 Assembler_ptr createAssembler(std::string type,
const DataMap& constants)
const;
234 virtual void balanceNeighbours(
escript::Data& data,
bool average)
const;
258 void integral_order2(std::vector<double>&,
const escript::Data&)
const;
259 void integral_order3(std::vector<double>&,
const escript::Data&)
const;
260 void integral_order4(std::vector<double>&,
const escript::Data&)
const;
261 void integral_order5(std::vector<double>&,
const escript::Data&)
const;
262 void integral_order6(std::vector<double>&,
const escript::Data&)
const;
263 void integral_order7(std::vector<double>&,
const escript::Data&)
const;
264 void integral_order8(std::vector<double>&,
const escript::Data&)
const;
265 void integral_order9(std::vector<double>&,
const escript::Data&)
const;
266 void integral_order10(std::vector<double>&,
const escript::Data&)
const;
268 void setCornerNeighbours();
269 void shareEdges(
escript::Data& out,
int rx,
int ry,
int rz)
const;
270 void shareFaces(
escript::Data& out,
int rx,
int ry,
int rz)
const;
279 void populateSampleIds();
282 bool addS,
bool addF,
index_t firstNode,
int nEq=1,
int nComp=1)
const;
284 template<
typename ValueType>
285 void readBinaryGridImpl(
escript::Data& out,
const std::string& filename,
288 #ifdef ESYS_HAVE_BOOST_IO 289 template<
typename ValueType>
294 template<
typename ValueType>
296 const std::string& filename,
int byteOrder)
const;
298 dim_t findNode(
const double *coords)
const;
302 long seed,
const boost::python::tuple& filter)
const;
305 int neighbour_ranks[8];
309 bool neighbour_exists[8];
356 return m_nodeId[node];
361 return (m_gNE[0]*m_order+1)*(m_gNE[1]*m_order+1)*(m_gNE[2]*m_order+1);
366 ESYS_ASSERT(dim>=0 && dim<m_numDim,
"'dim' out of bounds");
367 ESYS_ASSERT(index>=0 && index<m_NN[dim],
"'index' out of bounds");
369 + m_dx[dim]*(m_offset[dim] + index/m_order
375 return boost::python::make_tuple(
376 boost::python::make_tuple(m_origin[0], m_origin[1], m_origin[2]),
377 boost::python::make_tuple(m_dx[0], m_dx[1], m_dx[2]),
378 boost::python::make_tuple(m_gNE[0], m_gNE[1], m_gNE[2]));
384 return getNumNodes();
390 return m_NN[0] * m_NN[1] * m_NN[2];
396 return m_NE[0]*m_NE[1]*m_NE[2];
401 #endif // __Speckley_BRICK_H__ Definition: FunctionSpace.h:34
Definition: AbstractAssembler.cpp:18
SpeckleyDomain extends the AbstractContinuousDomain interface for the Speckley library and is the bas...
Definition: speckley/src/SpeckleyDomain.h:84
escript::Data readBinaryGridFromZipped(std::string filename, escript::FunctionSpace fs, const object &pyShape, double fill, int byteOrder, int dataType, const object &pyFirst, const object &pyNum, const object &pyMultiplier, const object &pyReverse)
Definition: speckleycpp.cpp:85
bool probeInterpolationAcross(int fsType_source, const escript::AbstractDomain &domain, int fsType_target, int dim)
Definition: CrossDomainCoupler.cpp:31
IndexVector m_elementId
Definition: speckley/src/Brick.h:343
virtual dim_t getDofOfNode(dim_t node) const
Definition: speckley/src/Brick.h:354
std::vector< real_t > DoubleVector
Definition: Speckley.h:43
IndexVector m_dofId
vector of sample reference identifiers
Definition: speckley/src/Brick.h:341
virtual dim_t getNumDOF() const
returns the number of degrees of freedom per MPI rank
Definition: speckley/src/Brick.h:382
Definition: speckley/src/DefaultAssembler3D.h:31
virtual IndexVector getNodeDistribution() const
returns the node distribution vector
Definition: speckley/src/Brick.h:166
virtual const int * getNumSubdivisionsPerDim() const
returns the number of spatial subdivisions in each dimension
Definition: speckley/src/Brick.h:172
Definition: CrossDomainCoupler.h:28
std::map< std::string, escript::Data > DataMap
Definition: speckley/src/domainhelpers.h:24
virtual dim_t getNumDataPointsGlobal() const
returns the number of data points summed across all MPI processes
Definition: speckley/src/Brick.h:359
std::vector< int > ShapeType
The shape of a single datapoint.
Definition: DataTypes.h:42
#define Speckley_DLL_API
Definition: speckley/src/system_dep.h:22
const double * getLength() const
returns the lengths of the domain
Definition: speckley/src/Brick.h:214
Structure that wraps parameters for the grid reading routines.
Definition: speckley/src/SpeckleyDomain.h:51
int index_t
type for array/matrix indices used both globally and on each rank
Definition: DataTypes.h:59
boost::shared_ptr< SubWorld > SubWorld_ptr
Definition: SubWorld.h:146
escript::Data readNcGrid(std::string filename, std::string varname, escript::FunctionSpace fs, const object &pyShape, double fill, const object &pyFirst, const object &pyNum, const object &pyMultiplier, const object &pyReverse)
Definition: speckleycpp.cpp:114
Data represents a collection of datapoints.
Definition: Data.h:63
IndexVector m_nodeDistribution
Definition: speckley/src/Brick.h:346
std::vector< index_t > IndexVector
Definition: Speckley.h:42
virtual dim_t getNumElements() const
returns the number of elements per MPI rank
Definition: speckley/src/Brick.h:394
escript::Data readBinaryGrid(std::string filename, escript::FunctionSpace fs, const object &pyShape, double fill, int byteOrder, int dataType, const object &pyFirst, const object &pyNum, const object &pyMultiplier, const object &pyReverse)
Definition: speckleycpp.cpp:60
std::map< std::string, int > TagMap
Definition: Speckley.h:44
virtual boost::python::tuple getGridParameters() const
returns the tuple (origin, spacing, number_of_elements)
Definition: speckley/src/Brick.h:373
Brick is the 3-dimensional implementation of a SpeckleyDomain.
Definition: speckley/src/Brick.h:32
Base class for escript system matrices.
Definition: AbstractSystemMatrix.h:42
const double point_locations[][11]
Definition: Speckley.h:59
Definition: speckley/src/WaveAssembler3D.h:31
virtual dim_t getNumNodes() const
returns the number of nodes per MPI rank
Definition: speckley/src/Brick.h:388
virtual double getLocalCoordinate(index_t index, int dim) const
returns the index'th coordinate value in given dimension for this rank
Definition: speckley/src/Brick.h:364
Base class for all escript domains.
Definition: AbstractDomain.h:45
#define ESYS_ASSERT(a, b)
EsysAssert is a MACRO that will throw an exception if the boolean condition specified is false...
Definition: Assert.h:78
virtual const dim_t * getNumNodesPerDim() const
returns the number of nodes per MPI rank in each dimension
Definition: speckley/src/Brick.h:147
IndexVector m_nodeId
Definition: speckley/src/Brick.h:342
#define S(_J_, _I_)
Definition: ShapeFunctions.cpp:121
virtual const dim_t * getNumFacesPerBoundary() const
returns the number of face elements in the order (left,right,bottom,top,front,back) on current MPI ra...
Definition: speckley/src/Brick.h:160
index_t dim_t
Definition: DataTypes.h:64
virtual const dim_t * getNumElementsPerDim() const
returns the number of elements per MPI rank in each dimension
Definition: speckley/src/Brick.h:153