17 #ifndef __RIPLEY_DOMAIN_H__ 18 #define __RIPLEY_DOMAIN_H__ 20 #include <ripley/Ripley.h> 21 #include <ripley/AbstractAssembler.h> 22 #include <ripley/RipleyException.h> 24 #include <escript/AbstractContinuousDomain.h> 25 #include <escript/Data.h> 26 #include <escript/FunctionSpace.h> 27 #include <escript/SubWorld.h> 30 #include <paso/Coupler.h> 31 #include <paso/SystemMatrix.h> 34 #ifdef ESYS_HAVE_TRILINOS 35 #include <trilinoswrap/types.h> 38 #include <boost/python/list.hpp> 39 #include <boost/python/tuple.hpp> 143 MPI_Barrier(m_mpiInfo->comm);
164 virtual bool isValidFunctionSpaceType(
int fsType)
const;
170 virtual std::string functionSpaceTypeAsString(
int fsType)
const;
176 virtual int getDim()
const {
return m_numDim; }
187 return !(operator==(other));
196 virtual std::pair<int,dim_t> getDataShape(
int fsType)
const;
204 int getTagFromSampleNo(
int fsType,
dim_t sampleNo)
const;
212 virtual void setTagMap(
const std::string& name,
int tag) {
213 m_tagMap[name] = tag;
221 virtual int getTag(
const std::string& name)
const {
222 if (m_tagMap.find(name) != m_tagMap.end()) {
223 return m_tagMap.find(name)->second;
235 return (m_tagMap.find(name)!=m_tagMap.end());
242 virtual std::string showTagNames()
const;
263 virtual bool probeInterpolationOnDomain(
int fsType_source,
int fsType_target)
const;
272 virtual signed char preferredInterpolationOnDomain(
int fsType_source,
273 int fsType_target)
const;
282 commonFunctionSpace(
const std::vector<int>& fs,
int& resultcode)
const;
335 virtual void setTags(
int fsType,
int newTag,
const escript::Data& mask)
const;
342 virtual bool isCellOriented(
int fsType)
const;
356 virtual int getNumberOfTagsInUse(
int fsType)
const;
362 virtual const int* borrowListOfTagsInUse(
int fsType)
const;
368 virtual bool canTag(
int fsType)
const;
477 virtual int getSystemMatrixTypeId(
const boost::python::object& options)
const;
488 virtual int getTransportTypeId(
int solver,
int preconditioner,
int package,
489 bool symmetry)
const;
506 Assembler_ptr assembler)
const;
514 Assembler_ptr assembler)
const;
522 Assembler_ptr assembler)
const;
529 const boost::python::list& data,
530 Assembler_ptr assembler)
const;
538 Assembler_ptr assembler)
const;
542 virtual void addPDEToTransportProblem(
555 void addPDEToTransportProblemFromPython(
558 Assembler_ptr assembler)
const;
566 int column_blocksize,
582 virtual void Print_Mesh_Info(
bool full=
false)
const;
592 virtual void write(
const std::string& filename)
const = 0;
598 virtual std::string getDescription()
const = 0;
605 void dump(
const std::string& filename)
const = 0;
612 const dim_t* borrowSampleReferenceIDs(
int fsType)
const = 0;
654 virtual void writeBinaryGrid(
const escript::Data& in, std::string filename,
661 virtual bool ownSample(
int fsType,
index_t id)
const = 0;
667 virtual dim_t getNumDataPointsGlobal()
const = 0;
673 virtual const dim_t* getNumNodesPerDim()
const = 0;
679 virtual const dim_t* getNumElementsPerDim()
const = 0;
686 virtual const dim_t* getNumFacesPerBoundary()
const = 0;
692 virtual IndexVector getNodeDistribution()
const = 0;
698 virtual const int* getNumSubdivisionsPerDim()
const = 0;
704 virtual double getLocalCoordinate(
index_t index,
int dim)
const = 0;
710 virtual boost::python::tuple getGridParameters()
const = 0;
716 virtual const double *getLength()
const = 0;
722 virtual const double *getElementLength()
const = 0;
729 virtual RankVector getOwnerVector(
int fsType)
const = 0;
736 virtual bool supportsFilter(
const boost::python::tuple& t)
const;
742 const DataMap& options)
const {
749 Assembler_ptr createAssemblerFromPython(std::string type,
750 const boost::python::list& options)
const;
775 void updateTagsInUse(
int fsType)
const;
777 #ifdef ESYS_HAVE_PASO 778 void createPasoConnector(
const RankVector& neighbour,
794 #ifdef ESYS_HAVE_TRILINOS 795 esys_trilinos::const_TrilinosGraph_ptr createTrilinosGraph(
801 template<
typename Scalar>
804 const std::vector<Scalar>& array)
const;
806 void addPoints(
const std::vector<double>& coords,
807 const std::vector<int>& tags);
812 virtual dim_t getNumNodes()
const = 0;
815 virtual dim_t getNumElements()
const = 0;
818 virtual dim_t getNumDOF()
const = 0;
821 virtual dim_t getNumFaceElements()
const = 0;
824 virtual IndexVector getDiagonalIndices(
bool upperOnly)
const = 0;
827 virtual void assembleCoordinates(
escript::Data& arg)
const = 0;
835 #ifdef ESYS_HAVE_TRILINOS 836 virtual esys_trilinos::const_TrilinosGraph_ptr getTrilinosGraph()
const = 0;
841 virtual std::vector<IndexVector> getConnections(
bool includeShared)
const = 0;
843 #ifdef ESYS_HAVE_PASO 846 bool reducedRowOrder,
847 bool reducedColOrder)
const = 0;
853 bool reduced)
const = 0;
858 bool reduced)
const = 0;
866 virtual dim_t getDofOfNode(
dim_t node)
const = 0;
871 #ifdef ESYS_HAVE_PASO 883 const DataMap& coefs, Assembler_ptr assembler)
const;
889 Assembler_ptr assembler)
const;
893 Assembler_ptr assembler)
const;
896 virtual dim_t findNode(
const double *coords)
const = 0;
901 #endif // __RIPLEY_DOMAIN_H__ AbstractContinuousDomain, base class for continuous domains.
Definition: AbstractContinuousDomain.h:45
Definition: FunctionSpace.h:34
boost::shared_ptr< Pattern > Pattern_ptr
Definition: Pattern.h:37
virtual bool onMasterProcessor() const
returns true if on MPI processor 0, else false
Definition: ripley/src/RipleyDomain.h:151
int dataType
data type in the file (used by binary reader only)
Definition: ripley/src/RipleyDomain.h:82
SystemMatrixType
Definition: ripley/src/RipleyDomain.h:49
dim_t node
Definition: ripley/src/RipleyDomain.h:91
bool probeInterpolationAcross(int fsType_source, const escript::AbstractDomain &domain, int fsType_target, int dim)
Definition: CrossDomainCoupler.cpp:31
Definition: ripley/src/RipleyDomain.h:59
virtual bool supportsContactElements() const
returns true if this domain supports contact elements, false otherwise
Definition: ripley/src/RipleyDomain.h:380
std::vector< int > RankVector
Definition: Ripley.h:45
escript::Data readNcGrid(std::string filename, std::string varname, escript::FunctionSpace fs, const object &pyShape, double fill, const object &pyFirst, const object &pyNum, const object &pyMultiplier, const object &pyReverse)
Definition: ripleycpp.cpp:116
Definition: ripley/src/RipleyDomain.h:61
virtual int getReducedFunctionOnContactZeroCode() const
returns a FunctionOnContactZero code with reduced integration order
Definition: ripley/src/RipleyDomain.h:431
static DecompositionPolicy m_decompPolicy
Definition: ripley/src/RipleyDomain.h:869
virtual int getReducedFunctionCode() const
returns a function with reduced integration order FunctionSpace code
Definition: ripley/src/RipleyDomain.h:404
virtual Assembler_ptr createAssembler(std::string type, const DataMap &options) const
Definition: ripley/src/RipleyDomain.h:741
Definition: ripley/src/RipleyDomain.h:45
virtual int getMPIRank() const
returns the MPI rank of this processor
Definition: ripley/src/RipleyDomain.h:135
Definition: ripley/src/RipleyDomain.h:60
int byteOrder
byte order in the file (used by binary reader only)
Definition: ripley/src/RipleyDomain.h:80
virtual void MPIBarrier() const
if compiled for MPI then executes an MPI_Barrier, else does nothing
Definition: ripley/src/RipleyDomain.h:141
std::vector< int > m_faceTagsInUse
Definition: ripley/src/RipleyDomain.h:760
A struct to contain a dirac point's information.
Definition: ripley/src/RipleyDomain.h:89
Definition: ripley/src/RipleyDomain.h:44
boost::shared_ptr< JMPI_ > JMPI
Definition: EsysMPI.h:71
assembler_t assembler_type
Definition: ripley/src/RipleyDomain.h:763
Definition: ripley/src/RipleyDomain.h:51
std::vector< int > m_nodeTagsInUse
Definition: ripley/src/RipleyDomain.h:758
Definition: ripley/src/RipleyDomain.h:50
static dim_t M
Definition: SparseMatrix_saveHB.cpp:37
std::vector< int > reverse
if non-zero, values are written from last index to first index
Definition: ripley/src/RipleyDomain.h:78
virtual int getFunctionOnBoundaryCode() const
returns a function on boundary FunctionSpace code
Definition: ripley/src/RipleyDomain.h:410
virtual StatusType getStatus() const
returns a status indicator of the domain. The status identifier should be unique over the lifetime of...
Definition: ripley/src/RipleyDomain.h:350
escript::Data readBinaryGrid(std::string filename, escript::FunctionSpace fs, const object &pyShape, double fill, int byteOrder, int dataType, const object &pyFirst, const object &pyNum, const object &pyMultiplier, const object &pyReverse)
Definition: ripleycpp.cpp:62
assembler_t
Definition: ripley/src/RipleyDomain.h:43
boost::shared_ptr< SystemMatrixPattern > SystemMatrixPattern_ptr
Definition: SystemMatrixPattern.h:39
boost::shared_ptr< AbstractTransportProblem > ATP_ptr
Definition: AbstractTransportProblem.h:160
std::map< std::string, int > TagMap
Definition: Ripley.h:46
virtual int getApproximationOrder(int fsType) const
returns the approximation order used for a function space
Definition: ripley/src/RipleyDomain.h:374
IndexVector m_diracPointNodeIDs
Definition: ripley/src/RipleyDomain.h:762
int index_t
type for array/matrix indices used both globally and on each rank
Definition: DataTypes.h:59
std::vector< index_t > IndexVector
Definition: Ripley.h:43
StatusType m_status
Definition: ripley/src/RipleyDomain.h:755
Definition: ripley/src/RipleyDomain.h:52
std::map< std::string, escript::Data > DataMap
Definition: ripley/src/domainhelpers.h:24
virtual int getReducedFunctionOnContactOneCode() const
returns a FunctionOnContactOne code with reduced integration order
Definition: ripley/src/RipleyDomain.h:447
boost::shared_ptr< SubWorld > SubWorld_ptr
Definition: SubWorld.h:146
An exception class for features which are not (yet) implemented.
Definition: EsysException.h:78
virtual int getSolutionCode() const
returns a Solution FunctionSpace code
Definition: ripley/src/RipleyDomain.h:455
virtual int getDim() const
returns the number of spatial dimensions of the domain
Definition: ripley/src/RipleyDomain.h:176
Structure that wraps parameters for the grid reading routines.
Definition: ripley/src/RipleyDomain.h:68
std::vector< int > multiplier
Definition: ripley/src/RipleyDomain.h:76
int StatusType
Definition: AbstractDomain.h:48
this class holds a (distributed) stiffness matrix
Definition: SystemMatrix.h:47
std::vector< dim_t > numValues
the number of values to read from file
Definition: ripley/src/RipleyDomain.h:73
virtual int getFunctionOnContactOneCode() const
returns a FunctionOnContactOne code
Definition: ripley/src/RipleyDomain.h:439
virtual int getReducedContinuousFunctionCode() const
returns a continuous on reduced order nodes FunctionSpace code
Definition: ripley/src/RipleyDomain.h:392
Data represents a collection of datapoints.
Definition: Data.h:63
DecompositionPolicy
Definition: ripley/src/RipleyDomain.h:58
int m_numDim
Definition: ripley/src/RipleyDomain.h:754
Definition: ripley/src/RipleyDomain.h:53
virtual bool operator!=(const escript::AbstractDomain &other) const
inequality operator
Definition: ripley/src/RipleyDomain.h:186
virtual int getReducedSolutionCode() const
returns a ReducedSolution FunctionSpace code
Definition: ripley/src/RipleyDomain.h:461
virtual void setTagMap(const std::string &name, int tag)
sets a map from a clear tag name to a tag key
Definition: ripley/src/RipleyDomain.h:212
static dim_t N
Definition: SparseMatrix_saveHB.cpp:37
RipleyDomain extends the AbstractContinuousDomain interface for the Ripley library and is the base cl...
Definition: ripley/src/RipleyDomain.h:101
int MPI_Comm
Definition: EsysMPI.h:41
virtual int getReducedFunctionOnBoundaryCode() const
returns a function on boundary with reduced integration order FunctionSpace code
Definition: ripley/src/RipleyDomain.h:417
virtual int getFunctionOnContactZeroCode() const
return a FunctionOnContactZero code
Definition: ripley/src/RipleyDomain.h:423
int tag
Definition: ripley/src/RipleyDomain.h:92
virtual int getDiracDeltaFunctionsCode() const
returns a DiracDeltaFunctions FunctionSpace code
Definition: ripley/src/RipleyDomain.h:467
Give a short description of what AbstractTransportProblem does.
Definition: AbstractTransportProblem.h:43
An exception class that signals an invalid argument value.
Definition: EsysException.h:88
boost::shared_ptr< Connector > Connector_ptr
Definition: Coupler.h:37
Definition: ripley/src/RipleyDomain.h:46
virtual bool isValidTagName(const std::string &name) const
returns true if name is a defined tag name
Definition: ripley/src/RipleyDomain.h:234
std::vector< dim_t > first
the (global) offset into the data object to start writing into
Definition: ripley/src/RipleyDomain.h:71
Base class for escript system matrices.
Definition: AbstractSystemMatrix.h:42
virtual escript::JMPI getMPI() const
returns a reference to the MPI information wrapper for this domain
Definition: ripley/src/RipleyDomain.h:123
Definition: ripley/src/AbstractAssembler.h:25
std::vector< real_t > DoubleVector
Definition: Ripley.h:44
escript::Data readBinaryGridFromZipped(std::string filename, escript::FunctionSpace fs, const object &pyShape, double fill, int byteOrder, int dataType, const object &pyFirst, const object &pyNum, const object &pyMultiplier, const object &pyReverse)
Definition: ripleycpp.cpp:87
virtual int getMPISize() const
returns the number of processors used for this domain
Definition: ripley/src/RipleyDomain.h:129
std::vector< DiracPoint > m_diracPoints
Definition: ripley/src/RipleyDomain.h:761
boost::shared_ptr< AbstractSystemMatrix > ASM_ptr
Definition: AbstractSystemMatrix.h:32
virtual int getTag(const std::string &name) const
returns the tag key for tag name
Definition: ripley/src/RipleyDomain.h:221
std::vector< int > m_elementTagsInUse
Definition: ripley/src/RipleyDomain.h:759
Base class for all escript domains.
Definition: AbstractDomain.h:45
MPI_Comm getMPIComm() const
returns the MPI communicator
Definition: ripley/src/RipleyDomain.h:157
TagMap m_tagMap
Definition: ripley/src/RipleyDomain.h:757
virtual int getContinuousFunctionCode() const
returns a continuous FunctionSpace code
Definition: ripley/src/RipleyDomain.h:386
#define RIPLEY_DLL_API
Definition: ripley/src/system_dep.h:20
Definition: ripley/src/RipleyDomain.h:54
escript::JMPI m_mpiInfo
Definition: ripley/src/RipleyDomain.h:756
index_t dim_t
Definition: DataTypes.h:64
Definition: ripley/src/RipleyDomain.h:55
virtual int getFunctionCode() const
returns a function FunctionSpace code
Definition: ripley/src/RipleyDomain.h:398