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mi_masked.hh
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1 /* -*- mia-c++ -*-
2  *
3  * This file is part of MIA - a toolbox for medical image analysis
4  * Copyright (c) Leipzig, Madrid 1999-2017 Gert Wollny
5  *
6  * MIA is free software; you can redistribute it and/or modify
7  * it under the terms of the GNU General Public License as published by
8  * the Free Software Foundation; either version 3 of the License, or
9  * (at your option) any later version.
10  *
11  * This program is distributed in the hope that it will be useful,
12  * but WITHOUT ANY WARRANTY; without even the implied warranty of
13  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14  * GNU General Public License for more details.
15  *
16  * You should have received a copy of the GNU General Public License
17  * along with MIA; if not, see <http://www.gnu.org/licenses/>.
18  *
19  */
20 
21 #ifndef mia_template_mi_masked_hh
22 #define mia_template_mi_masked_hh
23 
25 
26 NS_BEGIN(NS)
27 
28 
30 template <typename T>
31 class TMIMaskedImageCost: public T
32 {
33 public:
34  typedef typename T::Data Data;
35  typedef typename T::Mask Mask;
36  typedef typename T::Force Force;
37 
38  TMIMaskedImageCost(size_t fbins, mia::PSplineKernel fkernel, size_t rbins, mia::PSplineKernel rkernel, double cut);
39 private:
40  virtual double do_value(const Data& a, const Data& b, const Mask& m) const;
41  virtual double do_evaluate_force(const Data& a, const Data& b, const Mask& m, Force& force) const;
42  virtual void post_set_reference(const Data& ref);
43  mutable mia::CSplineParzenMI m_parzen_mi;
44 
45 };
46 
47 
48 
54 template <typename CP, typename C>
55 class TMIMaskedImageCostPlugin: public CP
56 {
57 public:
58  TMIMaskedImageCostPlugin();
59  C *do_create()const;
60 private:
61  const std::string do_get_descr() const;
62  unsigned int m_rbins;
63  unsigned int m_mbins;
64  mia::PSplineKernel m_mkernel;
65  mia::PSplineKernel m_rkernel;
66  float m_histogram_cut;
67 };
68 
69 
71 NS_END
72 
73 #endif
splineparzenmi.hh
PSplineKernel
std::shared_ptr< CSplineKernel > PSplineKernel
Definition: splinekernel.hh:291
NS_BEGIN
#define NS_BEGIN(NS)
conveniance define to start a namespace
Definition: defines.hh:42
NS_END
#define NS_END
conveniance define to end a namespace
Definition: defines.hh:45