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pwiz::msdata::Reader::Config Struct Reference

Reader configuration. More...

#include <Reader.hpp>

Public Member Functions

 Config ()
 
 Config (const Config &rhs)
 

Public Attributes

bool simAsSpectra
 when true, sets certain vendor readers to produce SIM transitions as spectra instead of chromatograms More...
 
bool srmAsSpectra
 when true, sets certain vendor readers to produce SRM transitions as spectra instead of chromatograms More...
 
bool acceptZeroLengthSpectra
 when true, allows for skipping 0 length checks (and thus skip re-reading data for Sciex) More...
 
bool ignoreZeroIntensityPoints
 when true, allows certain vendor readers to produce profile data without zero intensity samples flanking each peak profile More...
 
bool combineIonMobilitySpectra
 when true, all drift bins/scans in a frame/block are written in combined form instead of as individual spectra More...
 
bool unknownInstrumentIsError
 when true, if a reader cannot identify an instrument, an exception will be thrown asking users to report it More...
 
bool adjustUnknownTimeZonesToHostTimeZone
 when true, if a reader does not know what time zone was used to record a time, it will assume the time refers to the host's local time; when false, the reader will treat times with unknown time zone as UTC More...
 

Detailed Description

Reader configuration.

Definition at line 43 of file Reader.hpp.

Constructor & Destructor Documentation

◆ Config() [1/2]

pwiz::msdata::Reader::Config::Config ( )

◆ Config() [2/2]

pwiz::msdata::Reader::Config::Config ( const Config rhs)

Member Data Documentation

◆ simAsSpectra

bool pwiz::msdata::Reader::Config::simAsSpectra

when true, sets certain vendor readers to produce SIM transitions as spectra instead of chromatograms

Definition at line 46 of file Reader.hpp.

◆ srmAsSpectra

bool pwiz::msdata::Reader::Config::srmAsSpectra

when true, sets certain vendor readers to produce SRM transitions as spectra instead of chromatograms

Definition at line 49 of file Reader.hpp.

◆ acceptZeroLengthSpectra

bool pwiz::msdata::Reader::Config::acceptZeroLengthSpectra

when true, allows for skipping 0 length checks (and thus skip re-reading data for Sciex)

Definition at line 52 of file Reader.hpp.

◆ ignoreZeroIntensityPoints

bool pwiz::msdata::Reader::Config::ignoreZeroIntensityPoints

when true, allows certain vendor readers to produce profile data without zero intensity samples flanking each peak profile

Definition at line 55 of file Reader.hpp.

◆ combineIonMobilitySpectra

bool pwiz::msdata::Reader::Config::combineIonMobilitySpectra

when true, all drift bins/scans in a frame/block are written in combined form instead of as individual spectra

Definition at line 58 of file Reader.hpp.

◆ unknownInstrumentIsError

bool pwiz::msdata::Reader::Config::unknownInstrumentIsError

when true, if a reader cannot identify an instrument, an exception will be thrown asking users to report it

Definition at line 61 of file Reader.hpp.

◆ adjustUnknownTimeZonesToHostTimeZone

bool pwiz::msdata::Reader::Config::adjustUnknownTimeZonesToHostTimeZone

when true, if a reader does not know what time zone was used to record a time, it will assume the time refers to the host's local time; when false, the reader will treat times with unknown time zone as UTC

Definition at line 65 of file Reader.hpp.


The documentation for this struct was generated from the following file: