Package org.jmol.modelset
Class HBond
- java.lang.Object
-
- org.jmol.util.Edge
-
- org.jmol.modelset.Bond
-
- org.jmol.modelset.HBond
-
- All Implemented Interfaces:
SimpleEdge
public class HBond extends Bond
-
-
Field Summary
Fields Modifier and Type Field Description (package private) float
energy
private static double
QConst
-
Fields inherited from class org.jmol.modelset.Bond
atom1, atom2, colix, mad, myVisibilityFlag, shapeVisibilityFlags
-
Fields inherited from class org.jmol.util.Edge
BOND_AROMATIC, BOND_AROMATIC_DOUBLE, BOND_AROMATIC_MASK, BOND_AROMATIC_SINGLE, BOND_COVALENT_DOUBLE, BOND_COVALENT_MASK, BOND_COVALENT_QUADRUPLE, BOND_COVALENT_QUINTUPLE, BOND_COVALENT_sextuple, BOND_COVALENT_SINGLE, BOND_COVALENT_TRIPLE, BOND_H_CALC, BOND_H_CALC_MASK, BOND_H_MINUS_3, BOND_H_MINUS_4, BOND_H_NUCLEOTIDE, BOND_H_PLUS_2, BOND_H_PLUS_3, BOND_H_PLUS_4, BOND_H_PLUS_5, BOND_H_REGULAR, BOND_HBOND_SHIFT, BOND_HYDROGEN_MASK, BOND_NEW, BOND_ORDER_ANY, BOND_ORDER_NULL, BOND_ORDER_UNSPECIFIED, BOND_PARTIAL_MASK, BOND_PARTIAL01, BOND_PARTIAL12, BOND_PARTIAL23, BOND_PARTIAL32, BOND_PYMOL_MULT, BOND_PYMOL_NOMULT, BOND_RENDER_SINGLE, BOND_STEREO_FAR, BOND_STEREO_MASK, BOND_STEREO_NEAR, BOND_STRUT, BOND_SULFUR_MASK, index, order, TYPE_ATROPISOMER, TYPE_ATROPISOMER_REV
-
-
Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description float
getEnergy()
static int
getEnergy(double distAH, double distCH, double distCD, double distAD)
-
Methods inherited from class org.jmol.modelset.Bond
deleteAtomReferences, getAtom, getAtomIndex1, getAtomIndex2, getCIPChirality, getCovalentOrder, getIdentity, getOtherAtom, getOtherNode, getValence, is, isAromatic, isCovalent, isHydrogen, isPartial, isStereo, setAtropisomerOptions, setCIPChirality, setMad, setOrder, setShapeVisibility, setTranslucent, toString
-
Methods inherited from class org.jmol.util.Edge
getArgbHbondType, getAtropismNode, getAtropismOrder, getAtropismOrder12, getBondOrderFromFloat, getBondOrderFromString, getBondOrderNameFromOrder, getBondOrderNumberFromOrder, getBondType, getCmlBondOrder, getCovalentBondOrder, getPartialBondDotted, getPartialBondOrder, isAtropism, isOrderH
-
-
-
-
Field Detail
-
energy
float energy
-
QConst
private static final double QConst
- See Also:
- Constant Field Values
-
-