Class CifDensityReader

  • All Implemented Interfaces:
    VertexDataServer

    class CifDensityReader
    extends BCifDensityReader
    CIF density reader. See https://www.ebi.ac.uk/pdbe/densities/x-ray/1eve/box, for example: https://www.ebi.ac.uk/pdbe/densities/x-ray/1eve/box/-4.413,55.607,64.124/-0.4130001,59.607,68.124?space=cartesian&encoding=cif Extends BCifDensityReader just enough to handle nonbinary CIF data.
    • Constructor Detail

      • CifDensityReader

        CifDensityReader()
    • Method Detail

      • getCifData

        protected void getCifData​(java.lang.String fileName,
                                  java.lang.Object data)
        Overrides:
        getCifData in class BCifDensityReader
      • readCifP3

        protected javajs.util.P3 readCifP3​(java.lang.String key,
                                           javajs.util.P3 p3)
        Overrides:
        readCifP3 in class BCifDensityReader
      • getCifMap

        protected java.util.Map<java.lang.String,​java.lang.Object> getCifMap​(java.lang.String type)
        Overrides:
        getCifMap in class BCifDensityReader