Package htsjdk.samtools.filter
Class FilteringIterator
- java.lang.Object
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- htsjdk.samtools.filter.FilteringSamIterator
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- htsjdk.samtools.filter.FilteringIterator
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- All Implemented Interfaces:
CloseableIterator<SAMRecord>
,Closeable
,AutoCloseable
,Iterator<SAMRecord>
@Deprecated public class FilteringIterator extends FilteringSamIterator
Deprecated.useFilteringSamIterator
insteadFiltering Iterator which takes a filter and an iterator and iterates through only those records which are not rejected by the filter. $Id$
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Constructor Summary
Constructors Constructor Description FilteringIterator(Iterator<SAMRecord> iterator, SamRecordFilter filter)
Deprecated.FilteringIterator(Iterator<SAMRecord> iterator, SamRecordFilter filter, boolean filterByPair)
Deprecated.
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Method Summary
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Methods inherited from class htsjdk.samtools.filter.FilteringSamIterator
close, hasNext, next, remove
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Methods inherited from interface htsjdk.samtools.util.CloseableIterator
stream, toList
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Methods inherited from interface java.util.Iterator
forEachRemaining
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Constructor Detail
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FilteringIterator
public FilteringIterator(Iterator<SAMRecord> iterator, SamRecordFilter filter, boolean filterByPair)
Deprecated.
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FilteringIterator
public FilteringIterator(Iterator<SAMRecord> iterator, SamRecordFilter filter)
Deprecated.
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