Package htsjdk.samtools
Enum SAMTag
- java.lang.Object
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- java.lang.Enum<SAMTag>
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- htsjdk.samtools.SAMTag
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- All Implemented Interfaces:
Serializable
,Comparable<SAMTag>
public enum SAMTag extends Enum<SAMTag>
The standard tags for a SAM record that are defined in the SAM spec.
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static SAMTag
valueOf(String name)
Returns the enum constant of this type with the specified name.static SAMTag[]
values()
Returns an array containing the constants of this enum type, in the order they are declared.
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Enum Constant Detail
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AM
public static final SAMTag AM
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AS
public static final SAMTag AS
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BC
public static final SAMTag BC
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BQ
public static final SAMTag BQ
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CC
public static final SAMTag CC
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CG
public static final SAMTag CG
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CM
public static final SAMTag CM
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CO
public static final SAMTag CO
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CP
public static final SAMTag CP
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CQ
public static final SAMTag CQ
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CS
public static final SAMTag CS
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CT
public static final SAMTag CT
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E2
public static final SAMTag E2
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FI
public static final SAMTag FI
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FS
public static final SAMTag FS
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FT
public static final SAMTag FT
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FZ
public static final SAMTag FZ
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GC
public static final SAMTag GC
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GS
public static final SAMTag GS
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GQ
public static final SAMTag GQ
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LB
public static final SAMTag LB
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H0
public static final SAMTag H0
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H1
public static final SAMTag H1
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H2
public static final SAMTag H2
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HI
public static final SAMTag HI
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IH
public static final SAMTag IH
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MC
public static final SAMTag MC
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MF
public static final SAMTag MF
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MD
public static final SAMTag MD
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MQ
public static final SAMTag MQ
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NH
public static final SAMTag NH
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NM
public static final SAMTag NM
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OQ
public static final SAMTag OQ
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OP
public static final SAMTag OP
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OC
public static final SAMTag OC
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OF
public static final SAMTag OF
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OR
public static final SAMTag OR
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PG
public static final SAMTag PG
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PQ
public static final SAMTag PQ
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PT
public static final SAMTag PT
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PU
public static final SAMTag PU
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QT
public static final SAMTag QT
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Q2
public static final SAMTag Q2
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R2
public static final SAMTag R2
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RG
public static final SAMTag RG
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RT
public static final SAMTag RT
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S2
public static final SAMTag S2
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SA
public static final SAMTag SA
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SM
public static final SAMTag SM
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SQ
public static final SAMTag SQ
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TC
public static final SAMTag TC
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U2
public static final SAMTag U2
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UQ
public static final SAMTag UQ
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Method Detail
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values
public static SAMTag[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:for (SAMTag c : SAMTag.values()) System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in the order they are declared
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valueOf
public static SAMTag valueOf(String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is null
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