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elxTransformRigidityPenaltyTerm.h
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1 /*=========================================================================
2  *
3  * Copyright UMC Utrecht and contributors
4  *
5  * Licensed under the Apache License, Version 2.0 (the "License");
6  * you may not use this file except in compliance with the License.
7  * You may obtain a copy of the License at
8  *
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10  *
11  * Unless required by applicable law or agreed to in writing, software
12  * distributed under the License is distributed on an "AS IS" BASIS,
13  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14  * See the License for the specific language governing permissions and
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16  *
17  *=========================================================================*/
18 #ifndef __elxTransformRigidityPenaltyTerm_H__
19 #define __elxTransformRigidityPenaltyTerm_H__
20 
21 #include "elxIncludes.h" // include first to avoid MSVS warning
23 
24 namespace elastix
25 {
26 
109 template< class TElastix >
112  typename MetricBase< TElastix >::FixedImageType,
113  double >,
114  public MetricBase< TElastix >
115 {
116 public:
117 
122  double > Superclass1;
124  typedef itk::SmartPointer< Self > Pointer;
125  typedef itk::SmartPointer< const Self > ConstPointer;
126 
128  itkNewMacro( Self );
129 
132 
137  elxClassNameMacro( "TransformRigidityPenalty" );
138 
155  typedef typename Superclass1::RealType RealType;
178 
180 
182  itkStaticConstMacro( FixedImageDimension, unsigned int,
183  FixedImageType::ImageDimension );
184 
186  itkStaticConstMacro( MovingImageDimension, unsigned int,
187  MovingImageType::ImageDimension );
188 
197 
201  virtual void Initialize( void ) throw ( itk::ExceptionObject );
202 
207  virtual void BeforeEachResolution( void );
208 
215  virtual void BeforeRegistration( void );
216 
221  virtual void AfterEachIteration( void );
222 
227  virtual void SelectNewSamples( void ){}
228 
229 protected:
230 
233 
236 
237 private:
238 
240  TransformRigidityPenalty( const Self & ); // purposely not implemented
242  void operator=( const Self & ); // purposely not implemented
243 
244 };
245 
246 } // end namespace elastix
247 
248 #ifndef ITK_MANUAL_INSTANTIATION
249 #include "elxTransformRigidityPenaltyTerm.hxx"
250 #endif
251 
252 #endif // end #ifndef __elxTransformRigidityPenaltyTerm_H__
elastix::TransformRigidityPenalty::BeforeRegistration
virtual void BeforeRegistration(void)
elastix::TransformRigidityPenalty::RealType
Superclass1::RealType RealType
Definition: elxTransformRigidityPenaltyTerm.h:155
elastix::TransformRigidityPenalty::Pointer
itk::SmartPointer< Self > Pointer
Definition: elxTransformRigidityPenaltyTerm.h:124
itk::TransformRigidityPenaltyTerm::FixedImagePixelType
Superclass::FixedImagePixelType FixedImagePixelType
Definition: itkTransformRigidityPenaltyTerm.h:121
elastix::TransformRigidityPenalty::ITKBaseType
Superclass2::ITKBaseType ITKBaseType
Definition: elxTransformRigidityPenaltyTerm.h:196
itk::TransformRigidityPenaltyTerm::TransformJacobianType
Superclass::TransformJacobianType TransformJacobianType
Definition: itkTransformRigidityPenaltyTerm.h:104
itkTransformRigidityPenaltyTerm.h
elastix::TransformRigidityPenalty::ImageSampleContainerPointer
Superclass1::ImageSampleContainerPointer ImageSampleContainerPointer
Definition: elxTransformRigidityPenaltyTerm.h:173
itk::TransformRigidityPenaltyTerm::DerivativeType
Superclass::DerivativeType DerivativeType
Definition: itkTransformRigidityPenaltyTerm.h:118
itk::TransformRigidityPenaltyTerm::FixedImageRegionType
Superclass::FixedImageRegionType FixedImageRegionType
Definition: itkTransformRigidityPenaltyTerm.h:98
elastix::TransformRigidityPenalty::FixedImageMaskPointer
Superclass1::FixedImageMaskPointer FixedImageMaskPointer
Definition: elxTransformRigidityPenaltyTerm.h:162
elastix::MetricBase::ITKBaseType
itk::SingleValuedCostFunction ITKBaseType
Definition: elxMetricBase.h:100
elastix::TransformRigidityPenalty::itkStaticConstMacro
itkStaticConstMacro(MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
itk::TransformRigidityPenaltyTerm::FixedImageMaskType
Superclass::FixedImageMaskType FixedImageMaskType
Definition: itkTransformRigidityPenaltyTerm.h:113
elastix::MetricBase::RegistrationPointer
Superclass::RegistrationPointer RegistrationPointer
Definition: elxMetricBase.h:89
elastix::TransformRigidityPenalty::MovingImageLimiterOutputType
Superclass1::MovingImageLimiterOutputType MovingImageLimiterOutputType
Definition: elxTransformRigidityPenaltyTerm.h:177
itk::TransformRigidityPenaltyTerm::GradientImageType
Superclass::GradientImageType GradientImageType
Definition: itkTransformRigidityPenaltyTerm.h:109
SmartPointer< Self >
elastix::MetricBase
This class is the elastix base class for all Metrics.
Definition: elxMetricBase.h:73
elastix::TransformRigidityPenalty::FixedImageMaskType
Superclass1::FixedImageMaskType FixedImageMaskType
Definition: elxTransformRigidityPenaltyTerm.h:161
itk::TransformRigidityPenaltyTerm::MeasureType
Superclass::MeasureType MeasureType
Definition: itkTransformRigidityPenaltyTerm.h:117
elastix::TransformRigidityPenalty::operator=
void operator=(const Self &)
itk::TransformRigidityPenaltyTerm::OutputPointType
Superclass::OutputPointType OutputPointType
Definition: itkTransformRigidityPenaltyTerm.h:102
elastix::TransformRigidityPenalty::BeforeEachResolution
virtual void BeforeEachResolution(void)
itk::LimiterFunctionBase
Base class for all ITK limiter function objects.
Definition: itkLimiterFunctionBase.h:52
elastix::TransformRigidityPenalty::FixedImageType
Superclass1::FixedImageType FixedImageType
Definition: elxTransformRigidityPenaltyTerm.h:144
itk::TransformRigidityPenaltyTerm::FixedImageConstPointer
Superclass::FixedImageConstPointer FixedImageConstPointer
Definition: itkTransformRigidityPenaltyTerm.h:97
elastix::TransformRigidityPenalty::ConstPointer
itk::SmartPointer< const Self > ConstPointer
Definition: elxTransformRigidityPenaltyTerm.h:125
elastix::TransformRigidityPenalty::FixedImageConstPointer
Superclass1::FixedImageConstPointer FixedImageConstPointer
Definition: elxTransformRigidityPenaltyTerm.h:145
elastix::TransformRigidityPenalty::FixedImageLimiterType
Superclass1::FixedImageLimiterType FixedImageLimiterType
Definition: elxTransformRigidityPenaltyTerm.h:174
elastix::TransformRigidityPenalty::GradientImageFilterPointer
Superclass1::GradientImageFilterPointer GradientImageFilterPointer
Definition: elxTransformRigidityPenaltyTerm.h:160
elastix::TransformRigidityPenalty::ElastixPointer
Superclass2::ElastixPointer ElastixPointer
Definition: elxTransformRigidityPenaltyTerm.h:191
itk::TransformRigidityPenaltyTerm::CoordinateRepresentationType
Superclass::CoordinateRepresentationType CoordinateRepresentationType
Definition: itkTransformRigidityPenaltyTerm.h:87
itk::TransformRigidityPenaltyTerm::InterpolatorPointer
Superclass::InterpolatorPointer InterpolatorPointer
Definition: itkTransformRigidityPenaltyTerm.h:106
elastix::TransformRigidityPenalty::GradientImageFilterType
Superclass1::GradientImageFilterType GradientImageFilterType
Definition: elxTransformRigidityPenaltyTerm.h:159
itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >::MovingImageLimiterOutputType
MovingImageLimiterType::OutputType MovingImageLimiterOutputType
Definition: itkAdvancedImageToImageMetric.h:149
itk::TransformRigidityPenaltyTerm::TransformPointer
Superclass::TransformPointer TransformPointer
Definition: itkTransformRigidityPenaltyTerm.h:100
Image
elastix::TransformRigidityPenalty::GradientImagePointer
Superclass1::GradientImagePointer GradientImagePointer
Definition: elxTransformRigidityPenaltyTerm.h:158
elastix::TransformRigidityPenalty::InputPointType
Superclass1::InputPointType InputPointType
Definition: elxTransformRigidityPenaltyTerm.h:149
itk::TransformRigidityPenaltyTerm::RealType
Superclass::RealType RealType
Definition: itkTransformRigidityPenaltyTerm.h:107
itk::TransformRigidityPenaltyTerm::FixedImageType
Superclass::FixedImageType FixedImageType
Definition: itkTransformRigidityPenaltyTerm.h:95
elastix::TransformRigidityPenalty::OutputPointType
Superclass1::OutputPointType OutputPointType
Definition: elxTransformRigidityPenaltyTerm.h:150
itk::TransformRigidityPenaltyTerm::InterpolatorType
Superclass::InterpolatorType InterpolatorType
Definition: itkTransformRigidityPenaltyTerm.h:105
elastix::TransformRigidityPenalty::ImageSampleContainerType
Superclass1::ImageSampleContainerType ImageSampleContainerType
Definition: elxTransformRigidityPenaltyTerm.h:172
elastix::TransformRigidityPenalty::GradientPixelType
Superclass1::GradientPixelType GradientPixelType
Definition: elxTransformRigidityPenaltyTerm.h:156
itk::TransformRigidityPenaltyTerm::GradientImageFilterType
Superclass::GradientImageFilterType GradientImageFilterType
Definition: itkTransformRigidityPenaltyTerm.h:111
elastix::TransformRigidityPenalty::CoordinateRepresentationType
Superclass1::CoordinateRepresentationType CoordinateRepresentationType
Definition: elxTransformRigidityPenaltyTerm.h:140
elastix::TransformRigidityPenalty::ElastixType
Superclass2::ElastixType ElastixType
Definition: elxTransformRigidityPenaltyTerm.h:190
elastix::TransformRigidityPenalty::ParametersType
Superclass1::ParametersType ParametersType
Definition: elxTransformRigidityPenaltyTerm.h:167
elastix::TransformRigidityPenalty::~TransformRigidityPenalty
virtual ~TransformRigidityPenalty()
Definition: elxTransformRigidityPenaltyTerm.h:235
itk::TransformRigidityPenaltyTerm::MovingImageType
Superclass::MovingImageType MovingImageType
Definition: itkTransformRigidityPenaltyTerm.h:91
elastix::TransformRigidityPenalty::GradientImageType
Superclass1::GradientImageType GradientImageType
Definition: elxTransformRigidityPenaltyTerm.h:157
elastix::TransformRigidityPenalty::FixedImagePixelType
Superclass1::FixedImagePixelType FixedImagePixelType
Definition: elxTransformRigidityPenaltyTerm.h:168
elastix::TransformRigidityPenalty::itkStaticConstMacro
itkStaticConstMacro(FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
elastix::MetricBase::ConfigurationPointer
Superclass::ConfigurationPointer ConfigurationPointer
Definition: elxMetricBase.h:87
itk::TransformRigidityPenaltyTerm::GradientImageFilterPointer
Superclass::GradientImageFilterPointer GradientImageFilterPointer
Definition: itkTransformRigidityPenaltyTerm.h:112
elastix::TransformRigidityPenalty::AfterEachIteration
virtual void AfterEachIteration(void)
itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >::MovingImageRegionType
MovingImageType::RegionType MovingImageRegionType
Definition: itkAdvancedImageToImageMetric.h:134
elastix::TransformRigidityPenalty::FixedImageLimiterOutputType
Superclass1::FixedImageLimiterOutputType FixedImageLimiterOutputType
Definition: elxTransformRigidityPenaltyTerm.h:176
elastix::TransformRigidityPenalty::MovingImageRegionType
Superclass1::MovingImageRegionType MovingImageRegionType
Definition: elxTransformRigidityPenaltyTerm.h:169
elastix::TransformRigidityPenalty::CoefficientImageType
Superclass1::CoefficientImageType CoefficientImageType
Definition: elxTransformRigidityPenaltyTerm.h:179
elastix::TransformRigidityPenalty::MovingImageMaskType
Superclass1::MovingImageMaskType MovingImageMaskType
Definition: elxTransformRigidityPenaltyTerm.h:163
elastix::TransformRigidityPenalty::TransformRigidityPenalty
TransformRigidityPenalty()
Definition: elxTransformRigidityPenaltyTerm.h:232
elastix::MetricBase::ConfigurationType
Superclass::ConfigurationType ConfigurationType
Definition: elxMetricBase.h:86
itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >::FixedImageLimiterOutputType
FixedImageLimiterType::OutputType FixedImageLimiterOutputType
Definition: itkAdvancedImageToImageMetric.h:146
elastix::TransformRigidityPenalty::ImageSamplerType
Superclass1::ImageSamplerType ImageSamplerType
Definition: elxTransformRigidityPenaltyTerm.h:170
itk::TransformRigidityPenaltyTerm::MovingImageConstPointer
Superclass::MovingImageConstPointer MovingImageConstPointer
Definition: itkTransformRigidityPenaltyTerm.h:94
elastix::TransformRigidityPenalty
A penalty term based on non-rigidity.
Definition: elxTransformRigidityPenaltyTerm.h:115
itk::TransformRigidityPenaltyTerm::GradientImagePointer
Superclass::GradientImagePointer GradientImagePointer
Definition: itkTransformRigidityPenaltyTerm.h:110
elastix::TransformRigidityPenalty::MovingImageConstPointer
Superclass1::MovingImageConstPointer MovingImageConstPointer
Definition: elxTransformRigidityPenaltyTerm.h:143
elastix::TransformRigidityPenalty::MovingImageType
Superclass1::MovingImageType MovingImageType
Definition: elxTransformRigidityPenaltyTerm.h:141
elastix::TransformRigidityPenalty::MeasureType
Superclass1::MeasureType MeasureType
Definition: elxTransformRigidityPenaltyTerm.h:165
elastix::TransformRigidityPenalty::Initialize
virtual void Initialize(void)
elastix::TransformRigidityPenalty::ConfigurationType
Superclass2::ConfigurationType ConfigurationType
Definition: elxTransformRigidityPenaltyTerm.h:192
elxIncludes.h
elastix::TransformRigidityPenalty::InterpolatorPointer
Superclass1::InterpolatorPointer InterpolatorPointer
Definition: elxTransformRigidityPenaltyTerm.h:154
itk::TransformRigidityPenaltyTerm::TransformType
Superclass::TransformType TransformType
Definition: itkTransformRigidityPenaltyTerm.h:99
elastix::TransformRigidityPenalty::TransformRigidityPenalty
TransformRigidityPenalty(const Self &)
itk::TransformRigidityPenaltyTerm
A cost function that calculates a rigidity penalty term.
Definition: itkTransformRigidityPenaltyTerm.h:73
elastix::TransformRigidityPenalty::TransformPointer
Superclass1::TransformPointer TransformPointer
Definition: elxTransformRigidityPenaltyTerm.h:148
elastix::TransformRigidityPenalty::TransformType
Superclass1::TransformType TransformType
Definition: elxTransformRigidityPenaltyTerm.h:147
elastix::MetricBase::ElastixPointer
Superclass::ElastixPointer ElastixPointer
Definition: elxMetricBase.h:85
itk::TransformRigidityPenaltyTerm::GradientPixelType
Superclass::GradientPixelType GradientPixelType
Definition: itkTransformRigidityPenaltyTerm.h:108
elastix::TransformRigidityPenalty::Superclass2
MetricBase< TElastix > Superclass2
Definition: elxTransformRigidityPenaltyTerm.h:123
itk::TransformRigidityPenaltyTerm::InputPointType
Superclass::InputPointType InputPointType
Definition: itkTransformRigidityPenaltyTerm.h:101
elastix::TransformRigidityPenalty::ConfigurationPointer
Superclass2::ConfigurationPointer ConfigurationPointer
Definition: elxTransformRigidityPenaltyTerm.h:193
elastix::TransformRigidityPenalty::TransformJacobianType
Superclass1::TransformJacobianType TransformJacobianType
Definition: elxTransformRigidityPenaltyTerm.h:152
elastix::MetricBase::FixedImageType
ElastixType::FixedImageType FixedImageType
Definition: elxMetricBase.h:92
itk::TransformRigidityPenaltyTerm::FixedImageMaskPointer
Superclass::FixedImageMaskPointer FixedImageMaskPointer
Definition: itkTransformRigidityPenaltyTerm.h:114
elastix::TransformRigidityPenalty::ImageSamplerPointer
Superclass1::ImageSamplerPointer ImageSamplerPointer
Definition: elxTransformRigidityPenaltyTerm.h:171
elastix::TransformRigidityPenalty::MovingImagePixelType
Superclass1::MovingImagePixelType MovingImagePixelType
Definition: elxTransformRigidityPenaltyTerm.h:142
itk::TransformRigidityPenaltyTerm::TransformParametersType
Superclass::TransformParametersType TransformParametersType
Definition: itkTransformRigidityPenaltyTerm.h:103
elastix::TransformRigidityPenalty::elxClassNameMacro
elxClassNameMacro("TransformRigidityPenalty")
elastix::TransformRigidityPenalty::DerivativeType
Superclass1::DerivativeType DerivativeType
Definition: elxTransformRigidityPenaltyTerm.h:166
elastix::TransformRigidityPenalty::SelectNewSamples
virtual void SelectNewSamples(void)
Definition: elxTransformRigidityPenaltyTerm.h:227
elastix::TransformRigidityPenalty::TransformParametersType
Superclass1::TransformParametersType TransformParametersType
Definition: elxTransformRigidityPenaltyTerm.h:151
elastix::TransformRigidityPenalty::MovingImageMaskPointer
Superclass1::MovingImageMaskPointer MovingImageMaskPointer
Definition: elxTransformRigidityPenaltyTerm.h:164
elastix::TransformRigidityPenalty::MovingImageLimiterType
Superclass1::MovingImageLimiterType MovingImageLimiterType
Definition: elxTransformRigidityPenaltyTerm.h:175
itk::TransformRigidityPenaltyTerm::MovingImageMaskType
Superclass::MovingImageMaskType MovingImageMaskType
Definition: itkTransformRigidityPenaltyTerm.h:115
itk::ImageSamplerBase
This class is a base class for any image sampler.
Definition: itkImageSamplerBase.h:45
elastix::MetricBase::ElastixType
Superclass::ElastixType ElastixType
Definition: elxMetricBase.h:81
elastix::TransformRigidityPenalty::Self
TransformRigidityPenalty Self
Definition: elxTransformRigidityPenaltyTerm.h:119
itk::VectorDataContainer
Define a front-end to the STL "vector" container that conforms to the IndexedContainerInterface.
Definition: itkVectorDataContainer.h:79
elastix::TransformRigidityPenalty::Superclass1
itk::TransformRigidityPenaltyTerm< typename MetricBase< TElastix >::FixedImageType, double > Superclass1
Definition: elxTransformRigidityPenaltyTerm.h:122
elastix::TransformRigidityPenalty::FixedImageRegionType
Superclass1::FixedImageRegionType FixedImageRegionType
Definition: elxTransformRigidityPenaltyTerm.h:146
itk::TransformRigidityPenaltyTerm::MovingImageMaskPointer
Superclass::MovingImageMaskPointer MovingImageMaskPointer
Definition: itkTransformRigidityPenaltyTerm.h:116
elastix::TransformRigidityPenalty::RegistrationPointer
Superclass2::RegistrationPointer RegistrationPointer
Definition: elxTransformRigidityPenaltyTerm.h:195
elastix::TransformRigidityPenalty::RegistrationType
Superclass2::RegistrationType RegistrationType
Definition: elxTransformRigidityPenaltyTerm.h:194
itk::TransformRigidityPenaltyTerm::ParametersType
Superclass::ParametersType ParametersType
Definition: itkTransformRigidityPenaltyTerm.h:120
elastix::TransformRigidityPenalty::InterpolatorType
Superclass1::InterpolatorType InterpolatorType
Definition: elxTransformRigidityPenaltyTerm.h:153
elastix
Definition: elxFixedGenericPyramid.h:25
itk::TransformRigidityPenaltyTerm::MovingImagePixelType
Superclass::MovingImagePixelType MovingImagePixelType
Definition: itkTransformRigidityPenaltyTerm.h:92
elastix::MetricBase::RegistrationType
Superclass::RegistrationType RegistrationType
Definition: elxMetricBase.h:88


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