Interface AccesionedLocation

  • All Superinterfaces:
    Accessioned, java.lang.Iterable<Location>, Location

    public interface AccesionedLocation
    extends Location, Accessioned
    A location which is bound to an AccessionID. This is common in INSDC locations where a location actually points to a remote sequence. This is especially common in records describing Genomic sequence assembly.
    Author:
    ayates
    • Method Detail

      • getProxySequenceReader

        ProxySequenceReader<? extends Compound> getProxySequenceReader()
        Return the proxy reader used to get sequence for this location. We assume that AccessionID is bound to the instance to facilitate this lookup.