public final class Accession extends java.lang.Object implements PhylogenyData, java.lang.Comparable<Accession>
Modifier and Type | Class and Description |
---|---|
static class |
Accession.Source |
Constructor and Description |
---|
Accession(java.lang.String value) |
Accession(java.lang.String value,
Accession.Source source) |
Accession(java.lang.String value,
java.lang.String source) |
Accession(java.lang.String value,
java.lang.String source,
java.lang.String comment) |
Modifier and Type | Method and Description |
---|---|
java.lang.StringBuffer |
asSimpleText() |
java.lang.StringBuffer |
asText() |
int |
compareTo(Accession o) |
PhylogenyData |
copy()
Creates a new PhylogenyData object with identical values as this
PhylogenyData.
|
boolean |
equals(java.lang.Object o) |
java.lang.String |
getComment() |
java.lang.String |
getSource() |
java.lang.String |
getValue() |
int |
hashCode() |
boolean |
isEqual(PhylogenyData data)
Compares this PhylogenyData to PhylogenyData data.
|
java.lang.StringBuffer |
toNHX() |
void |
toPhyloXML(java.io.Writer writer,
int level,
java.lang.String indentation)
Writes a phyloXML representation of this phylogeny data.
|
java.lang.String |
toString() |
public Accession(java.lang.String value)
public Accession(java.lang.String value, java.lang.String source)
public Accession(java.lang.String value, Accession.Source source)
public Accession(java.lang.String value, java.lang.String source, java.lang.String comment)
public java.lang.StringBuffer asSimpleText()
asSimpleText
in interface PhylogenyData
public java.lang.StringBuffer asText()
asText
in interface PhylogenyData
public int compareTo(Accession o)
compareTo
in interface java.lang.Comparable<Accession>
public PhylogenyData copy()
PhylogenyData
copy
in interface PhylogenyData
public boolean equals(java.lang.Object o)
equals
in class java.lang.Object
public java.lang.String getComment()
public java.lang.String getSource()
public java.lang.String getValue()
public int hashCode()
hashCode
in class java.lang.Object
public boolean isEqual(PhylogenyData data)
PhylogenyData
isEqual
in interface PhylogenyData
public java.lang.StringBuffer toNHX()
toNHX
in interface PhylogenyData
public void toPhyloXML(java.io.Writer writer, int level, java.lang.String indentation) throws java.io.IOException
PhylogenyData
toPhyloXML
in interface PhylogenyData
java.io.IOException
public java.lang.String toString()
toString
in class java.lang.Object