Package org.biojava.nbio.phosphosite
Class Dataset
- java.lang.Object
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- org.biojava.nbio.phosphosite.Dataset
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public class Dataset extends java.lang.Object
Phosphosite is available under the PhosphoSitePlus® is licensed under Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License and is freely available for non-commercial purposes from http://www.phosphosite.org/staticDownloads.do Please acknowledge PhosphoSitePlus®, www.phosphosite.org" at appropriate locations. Please cite : “Hornbeck PV, Kornhauser JM, Tkachev S, Zhang B, Skrzypek E, Murray B, Latham V, Sullivan M (2012) PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse. Nucleic Acids Res. 40(Database issue), D261–70.”. Created by ap3 on 31/10/2014.
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Field Summary
Fields Modifier and Type Field Description static java.lang.String
ACETYLATION
static java.lang.String
DISEASE_ASSOC
static java.lang.String
METHYLATION
static java.lang.String
PHOSPHORYLATION
static java.lang.String
REGULATORY
static java.lang.String
SUMOYLATION
static java.lang.String
UBIQUITINATION
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Constructor Summary
Constructors Constructor Description Dataset()
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description static void
copyFile(java.io.File src, java.io.File dst)
void
download()
void
downloadFile(java.net.URL u, java.io.File localFile)
java.io.File
getLocalDir()
java.io.File[]
getLocalFiles()
static void
main(java.lang.String[] args)
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Field Detail
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ACETYLATION
public static final java.lang.String ACETYLATION
- See Also:
- Constant Field Values
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DISEASE_ASSOC
public static final java.lang.String DISEASE_ASSOC
- See Also:
- Constant Field Values
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METHYLATION
public static final java.lang.String METHYLATION
- See Also:
- Constant Field Values
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PHOSPHORYLATION
public static final java.lang.String PHOSPHORYLATION
- See Also:
- Constant Field Values
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REGULATORY
public static final java.lang.String REGULATORY
- See Also:
- Constant Field Values
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SUMOYLATION
public static final java.lang.String SUMOYLATION
- See Also:
- Constant Field Values
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UBIQUITINATION
public static final java.lang.String UBIQUITINATION
- See Also:
- Constant Field Values
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Method Detail
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getLocalFiles
public java.io.File[] getLocalFiles()
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getLocalDir
public java.io.File getLocalDir()
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download
public void download()
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downloadFile
public void downloadFile(java.net.URL u, java.io.File localFile) throws java.io.IOException
- Throws:
java.io.IOException
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copyFile
public static void copyFile(java.io.File src, java.io.File dst) throws java.io.IOException
- Throws:
java.io.IOException
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main
public static void main(java.lang.String[] args)
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